PPDB

PPDB	The Plant Proteome Database

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AT1G13220.2 nuclear matrix constituent protein-like protein

Lab Annot.

LINC2 (LITTLE NUCLEI2)
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G13220.3 11 Arabidopsis thaliana 0 1128 100 100 0 (0) M
AT1G13220.1 11 Arabidopsis thaliana 0 369 99 99 0 (0) M
AT1G68790.1 11 Arabidopsis thaliana 0 1147 40 58 2 (2) _
Os02g48010.1 7 Oryza sativa 3E-117 769 34 63 23 (23) M
Os01g56140.1 7 Oryza sativa 9E-66 833 30 53 6 (6) _
Zm00001eb188670_P001 agpv5 Zea mays 2E-112 834 34 60 0 (0) M
Zm00001eb188670_P003 agpv5 Zea mays 2E-112 834 34 60 0 (0) M
Zm00001eb188670_P002 agpv5 Zea mays 2E-112 834 34 60 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AT_hook(1) CENP-B_dimeris(1)
TargetP:	Cytoplasm (Class 3 C0.286; M0.162; S0.060; _0.692)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1128 aa (-cTP 1111)
Molecular Weight	129.92 kDA(-cTP )
PI	5.08(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

16358359(cell suspension (Gamborg))
18463617(suspension cells-phosphorylated proteins)
19334764(plasma membrane (cell culture))
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data