PPDB

PPDB	The Plant Proteome Database

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AT1G13220.1 nuclear matrix constituent protein-like protein

Lab Annot.

Mapman: 29.5 protein.degradation

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G13220.3 11 Arabidopsis thaliana 0 382 99 99 0 (0) M
AT1G13220.2 11 Arabidopsis thaliana 0 369 99 99 0 (0) _
AT1G68790.1 11 Arabidopsis thaliana 2E-88 385 46 64 2 (2) _
Os02g48010.1 7 Oryza sativa 4E-62 284 44 70 23 (23) M
Os01g56140.1 7 Oryza sativa 6E-41 328 36 58 6 (6) _
v1_GRMZM2G015875_P01 4a53 Zea mays 5E-60 280 43 70 26 (26) M
Zm00001eb188670_P001 agpv5 Zea mays 5E-60 280 43 70 0 (0) M
Zm00001eb188670_P003 agpv5 Zea mays 5E-60 280 43 70 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATG16(2) DUF948(3) RNase_Y_N(2)
TargetP:	Mitochondria (Class 4 C0.237; M0.511; S0.031; _0.241)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	391 aa (-cTP 379)
Molecular Weight	45.37 kDA(-cTP )
PI	5.96(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

16358359(cell suspension (Gamborg))
18463617(suspension cells-phosphorylated proteins)
19334764(plasma membrane (cell culture))
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data