PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G13180.1   Actin-like ATPase superfamily protein
Lab Annot. Actin-like ATPase
Mapman: 31.1 cell.organisation
Curated Location
TAIR curated location: Arp2/3 protein complex12906796
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G42100.1 11Arabidopsis thaliana3E-72413345114 (9)_
AT5G09810.1 11Arabidopsis thaliana8E-7241934501113 (648)_
AT3G12110.1 11Arabidopsis thaliana1E-714133350131 (92)_
Os02g38340.1 7Oryza sativa042881910 (0)_
Os08g03440.1 7Oryza sativa043769810 (0)_
Os05g36290.1 7Oryza sativa5E-7241034500 (0)_
Zm00001eb261670_P004 agpv5Zea mays043770820 (0)_
GRMZM2G136662_P02 3.21Zea mays043770820 (0)_
GRMZM2G136662_P01 3.21Zea mays043764750 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Actin(1) FtsA(1) MreB_Mbl(2) Porin_6(2)
TargetP: Cytoplasm (Class 3 C0.198; M0.145; S0.067; _0.763)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 427 aa (-cTP 391)
Molecular Weight 47.66 kDA(-cTP )
PI 5.43(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2287Detail        [A. thaliana] Clp C1 WT
2289Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2297Detail        [A. thaliana] Clp C1 WT
2298Detail        [A. thaliana] Clp C1 WT
2306Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help