PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G13170.2   OSBP(oxysterol binding protein)-related protein 1D

Lab Annot. OSBP(oxysterol binding protein)-related protein 1D
Mapman: 31.4 cell.vesicle transport
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G13170.1 11Arabidopsis thaliana083797974 (4)C
AT4G08180.1 11Arabidopsis thaliana074061750 (0)_
AT4G08180.4 11Arabidopsis thaliana074061750 (0)_
Os12g18770.1 7Oryza sativa073369790 (0)_
Os03g49770.1 7Oryza sativa082556690 (0)C
Os10g40590.1 7Oryza sativa074351640 (0)_
Zm00001eb028310_P003 agpv5Zea mays074266780 (0)_
v1_GRMZM2G156608_P01 4a53Zea mays074266780 (0)_
GRMZM2G156608_P01 3.21Zea mays074266780 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: GAS(2) KTSC(1) Oxysterol_BP(1) PH(3) PH_11(2) PH_8(2)
TargetP: Chloroplast (Class 5 C0.603; M0.049; S0.036; _0.443)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 837 aa (-cTP 802)
Molecular Weight 95.03 kDA(-cTP 91.33)
PI 6.38(-cTP 6.43)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1386Detail        [A. thaliana] chloroplast fractionation  
1389Detail        [A. thaliana] chloroplast fractionation  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help