PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G13080.2   cytochrome P450%2C family 71%2C subfamily B%2C polypeptide 2

Lab Annot. cytochrome P450, family 71, subfamily B
Mapman: 26.1 misc.cytochrome P450
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G13080.1 11Arabidopsis thaliana036897986 (6)S
AT3G26180.1 11Arabidopsis thaliana4E-16737861781 (1)S
AT3G26170.1 11Arabidopsis thaliana2E-16637860790 (0)S
Os07g19210.1 7Oryza sativa3E-10436443640 (0)_
Os12g32850.1 7Oryza sativa4E-9036042610 (0)S
Os03g63310.1 7Oryza sativa8E-8736238590 (0)S
Zm00001eb305330_P001 agpv5Zea mays1E-10836944650 (0)_
Zm00001eb064510_P001 agpv5Zea mays2E-10337240620 (0)M
v1_GRMZM2G159353_P01 4a53Zea mays2E-10337240620 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LOH1CR12(2) p450(1)
TargetP: Mitochondria (Class 3 C0.046; M0.767; S0.013; _0.343)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 384 aa (-cTP 318)
Molecular Weight 44.35 kDA(-cTP )
PI 6.05(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help