PPDB

PPDB	The Plant Proteome Database

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AT1G13040.1 Pentatricopeptide repeat (PPR-like) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G13040.2 11 Arabidopsis thaliana 0 517 100 100 0 (0) M
AT1G62910.1 11 Arabidopsis thaliana 8E-78 539 28 50 0 (0) M
AT1G63150.1 11 Arabidopsis thaliana 4E-76 554 29 51 0 (0) M
Os07g48850.2 7 Oryza sativa 1E-142 505 42 61 0 (0) M
Os07g48850.1 7 Oryza sativa 1E-142 505 42 61 0 (0) M
Os10g35240.1 7 Oryza sativa 3E-65 539 26 46 0 (0) M
GRMZM2G327042_P01 3.21 Zea mays 1E-142 506 43 62 0 (0) M
v1_GRMZM2G327042_P01 4a53 Zea mays 1E-142 506 43 62 0 (0) M
Zm00001eb331140_P001 agpv5 Zea mays 1E-142 506 43 62 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AEP1(3) Amidase_5(1) Clathrin(1) Coat_F(2) DUF3368(2) MNE1(2) MRP-S27(4) PLA2_in
TargetP:	Mitochondria (Class 3 C0.020; M0.785; S0.050; _0.217)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	517 aa (-cTP 481)
Molecular Weight	58.68 kDA(-cTP )
PI	8.44(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17151019(vacuole - suspension cell)
19995728(proplastid (Brassica napus))

Comparative Proteomics Data