PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G12960.1   Ribosomal protein L18e/L15 superfamily protein

Lab Annot.
Mapman: 29.2.1.2.2.527 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L27A
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G70600.1 11Arabidopsis thaliana7E-421455557107 (85)_
AT1G23290.1 11Arabidopsis thaliana9E-421455557112 (87)_
Os07g42170.1 7Oryza sativa1E-35146505554 (54)M
Os03g29460.1 7Oryza sativa3E-3514548549 (9)_
Os02g07890.2 7Oryza sativa4E-35143485538 (38)_
GRMZM2G096123_P01 3.21Zea mays1E-36145515568 (65)_
Zm00001eb109030_P001 agpv5Zea mays1E-3614551550 (0)_
GRMZM2G030731_P01 3.21Zea mays2E-36145515568 (67)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ribosomal_L27A(2)
TargetP: Mitochondria (Class 4 C0.093; M0.670; S0.008; _0.434)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 104 aa (-cTP 72)
Molecular Weight 11.81 kDA(-cTP )
PI 10.62(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help