PPDB

The Plant Proteome Database

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AT1G12950.1   root hair specific 2

Lab Annot.
Mapman: 34.99 transport.misc
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G26590.1 11Arabidopsis thaliana052273830 (0)_
AT5G38030.1 11Arabidopsis thaliana052272820 (0)_
AT3G26590.2 11Arabidopsis thaliana039879880 (0)_
Os08g43654.1 7Oryza sativa3E-17349653680 (0)_
Os03g42830.1 7Oryza sativa1E-15945650700 (0)S
Os03g37640.1 7Oryza sativa3E-15645851674 (4)_
GRMZM2G481440_P02 3.21Zea mays050452690 (0)_
Zm00001eb202870_P001 agpv5Zea mays050452690 (0)_
v1_GRMZM2G027016_P01 4a53Zea mays3E-16646151710 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MatE(2)
TargetP: Cytoplasm (Class 1 C0.103; M0.044; S0.052; _0.960)
Predotar:
Subcel. Location:
TM-HMM prediction: 12 TMs
Aramemnon: 11 TMs
TAT position:
Length 522 aa (-cTP 460)
Molecular Weight 56.91 kDA(-cTP )
PI 5.41(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
738Detail        [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help