PPDB

PPDB	The Plant Proteome Database

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AT1G12760.1 Zinc finger%2C C3HC4 type (RING finger) family protein

Lab Annot.

Zinc finger, C3HC4 type (RING finger) protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G12760.2 11 Arabidopsis thaliana 0 337 100 100 0 (0) _
AT1G63170.1 11 Arabidopsis thaliana 2E-167 355 77 84 0 (0) C
AT4G11680.1 11 Arabidopsis thaliana 2E-160 355 65 76 0 (0) C
Os02g45240.1 7 Oryza sativa 2E-143 347 62 77 0 (0) C
Os04g48050.1 7 Oryza sativa 1E-140 328 64 78 0 (0) _
Os07g27950.2 7 Oryza sativa 9E-131 350 61 71 0 (0) C
Zm00001eb096500_P001 agpv5 Zea mays 2E-150 371 59 71 0 (0) C
Zm00001eb073720_P001 agpv5 Zea mays 9E-142 347 61 76 0 (0) C
v1_GRMZM2G072462_P01 4a53 Zea mays 9E-142 347 61 76 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4131(2) GAGA(1) MgtE(2) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1)
TargetP:	Chloroplast (Class 4 C0.754; M0.015; S0.089; _0.425)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	5 TMs
Aramemnon:	3 TMs
TAT position:
Length	408 aa (-cTP 328)
Molecular Weight	45.09 kDA(-cTP 36.73)
PI	5.41(-cTP 5.26)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data