PPDB

 The Plant Proteome Database

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AT1G12750.1   RHOMBOID-like protein 6
Lab Annot. rhomboid protease 6 (AtRBL6)
Mapman: 29.5.5.10* protein.degradation.serine protease ST.S54
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G12750.7 11Arabidopsis thaliana03071001000 (0)M
AT1G12750.4 11Arabidopsis thaliana03071001000 (0)M
AT1G12750.6 11Arabidopsis thaliana03071001000 (0)M
Os09g35730.1 7Oryza sativa5E-132296637649 (49)_
Os03g02530.1 7Oryza sativa4E-13029858760 (0)_
Os08g43320.1 7Oryza sativa4E-126301587424 (24)_
Zm00001eb103190_P002 agpv5Zea mays5E-12929462760 (0)_
GRMZM2G033937_P01 3.21Zea mays5E-12929462768 (8)_
v1_GRMZM2G033937_P01 4a53Zea mays5E-12929462765 (5)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DER1(2) DUF2892(2) Rhomboid(2)
TargetP: Mitochondria (Class 5 C0.075; M0.664; S0.021; _0.527)
Predotar:
Subcel. Location:
TM-HMM prediction: 7 TMs
Aramemnon: 7 TMs
TAT position:
Length 307 aa (-cTP 231)
Molecular Weight 34.29 kDA(-cTP )
PI 9.34(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help