PPDB

PPDB	The Plant Proteome Database

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AT1G12700.1 RNA processing FACTOR

Lab Annot.

ATP binding;nucleic acid binding;helicases
Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G12700.3 11 Arabidopsis thaliana 0 602 100 100 0 (0) _
AT1G12700.2 11 Arabidopsis thaliana 0 602 100 100 0 (0) _
AT1G12300.1 11 Arabidopsis thaliana 0 637 59 74 1 (1) M
Os10g35240.1 7 Oryza sativa 1E-96 517 30 55 0 (0) M
Os10g35240.2 7 Oryza sativa 1E-96 517 30 55 0 (0) M
Os08g01640.1 7 Oryza sativa 3E-92 527 29 55 0 (0) M
v1_GRMZM2G431850_P01 4a53 Zea mays 1E-89 519 28 56 0 (0) M
GRMZM2G431850_P01 3.21 Zea mays 1E-89 519 28 56 0 (0) M
Zm00001eb345130_P001 agpv5 Zea mays 1E-89 519 28 56 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AEP1(4) ATP13(3) B12-binding_2(3) DUF3368(5) ECSIT(5) Hpr_kinase_C(1) MRP-S27(4)
TargetP:	Mitochondria (Class 2 C0.055; M0.753; S0.037; _0.094)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	602 aa (-cTP 561)
Molecular Weight	67.18 kDA(-cTP )
PI	7.87(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data