PPDB

The Plant Proteome Database

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AT1G12700.1   RNA processing FACTOR

Lab Annot. ATP binding;nucleic acid binding;helicases
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G12700.3 11Arabidopsis thaliana06021001000 (0)_
AT1G12700.2 11Arabidopsis thaliana06021001000 (0)_
AT1G12300.1 11Arabidopsis thaliana063759741 (1)M
Os10g35240.1 7Oryza sativa1E-9651730550 (0)M
Os10g35240.2 7Oryza sativa1E-9651730550 (0)M
Os08g01640.1 7Oryza sativa3E-9252729550 (0)M
v1_GRMZM2G431850_P01 4a53Zea mays1E-8951928560 (0)M
GRMZM2G431850_P01 3.21Zea mays1E-8951928560 (0)M
Zm00001eb345130_P001 agpv5Zea mays1E-8951928560 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AEP1(4) ATP13(3) B12-binding_2(3) DUF3368(5) ECSIT(5) Hpr_kinase_C(1) MRP-S27(4)
TargetP: Mitochondria (Class 2 C0.055; M0.753; S0.037; _0.094)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 602 aa (-cTP 561)
Molecular Weight 67.18 kDA(-cTP )
PI 7.87(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help