PPDB

PPDB	The Plant Proteome Database

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AT1G12620.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G12300.1 11 Arabidopsis thaliana 0 624 84 90 1 (1) M
AT1G12775.1 11 Arabidopsis thaliana 0 624 79 88 0 (0) M
AT3G22470.1 11 Arabidopsis thaliana 0 594 69 83 2 (2) M
Os10g35240.1 7 Oryza sativa 6E-107 568 32 54 0 (0) M
Os10g35240.2 7 Oryza sativa 6E-107 568 32 54 0 (0) M
Os10g35436.1 7 Oryza sativa 5E-105 578 32 54 0 (0) M
v1_GRMZM2G431850_P01 4a53 Zea mays 2E-103 577 32 54 0 (0) M
GRMZM2G431850_P01 3.21 Zea mays 2E-103 577 32 54 0 (0) M
Zm00001eb345130_P001 agpv5 Zea mays 2E-103 577 32 54 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AEP1(4) ANAPC3(2) ATP13(4) B12-binding_2(3) MRP-S27(4) Mtf2(5) PAS_11(2) PPR(16)
TargetP:	Mitochondria (Class 3 C0.039; M0.790; S0.019; _0.191)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	621 aa (-cTP 594)
Molecular Weight	69.63 kDA(-cTP )
PI	7.91(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data