PPDB

The Plant Proteome Database

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AT1G12400.1   Nucleotide excision repair%2C TFIIH%2C subunit TTDA

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G12400.2 11Arabidopsis thaliana1E-47711001000 (0)S
AT1G12400.3 11Arabidopsis thaliana2E-396889940 (0)S
AT1G62886.1 11Arabidopsis thaliana3E-297064820 (0)S
Os07g38600.1 7Oryza sativa3E-377077900 (0)C
Os05g10980.1 7Oryza sativa3E-367075880 (0)_
GRMZM2G176455_P03 3.21Zea mays4E-366973890 (0)M
v1_GRMZM2G176455_P03 4a53Zea mays4E-366973890 (0)M
GRMZM2G176455_P02 3.21Zea mays1E-356973890 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Tfb5(1)
TargetP: Secreted (Class 5 C0.126; M0.081; S0.531; _0.398)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 71 aa (-cTP 60)
Molecular Weight 8.11 kDA(-cTP )
PI 6.23(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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