PPDB

The Plant Proteome Database

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AT1G12360.1   Sec1/munc18-like (SM) proteins superfamily

Lab Annot. Sec1/munc18-like (SM) protein
Mapman: 31.4 cell.vesicle transport
Curated Location
TAIR curated location: cytosol & peripheral to membrane of membrane fraction11157980
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G12120.1 11Arabidopsis thaliana065669820 (0)C
AT1G02010.1 11Arabidopsis thaliana065367820 (0)_
AT1G02010.2 11Arabidopsis thaliana065365810 (0)_
Os02g25580.1 7Oryza sativa066573860 (0)_
Os02g25580.2 7Oryza sativa056973850 (0)_
Os06g04450.1 7Oryza sativa065862780 (0)_
GRMZM5G830776_P01 3.21Zea mays064862783 (3)_
Zm00001eb377900_P002 agpv5Zea mays064660760 (0)_
v1_GRMZM2G468525_P01 4a53Zea mays053159753 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Sec1(1)
TargetP: Cytoplasm (Class 4 C0.294; M0.142; S0.109; _0.627)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 666 aa (-cTP 612)
Molecular Weight 75.08 kDA(-cTP )
PI 7.98(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
17317660(Plasma Membrane proteome)
18463617(suspension cells-phosphorylated proteins)
18931141(peroxisomes- high&low purity (cell culture))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help