PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G12360.1 Sec1/munc18-like (SM) proteins superfamily

Lab Annot.

Sec1/munc18-like (SM) protein
Mapman: 31.4 cell.vesicle transport

Curated Location

TAIR curated location: cytosol & peripheral to membrane of membrane fraction11157980

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G12120.1 11 Arabidopsis thaliana 0 656 69 82 0 (0) C
AT1G02010.1 11 Arabidopsis thaliana 0 653 67 82 0 (0) _
AT1G02010.2 11 Arabidopsis thaliana 0 653 65 81 0 (0) _
Os02g25580.1 7 Oryza sativa 0 665 73 86 0 (0) _
Os02g25580.2 7 Oryza sativa 0 569 73 85 0 (0) _
Os06g04450.1 7 Oryza sativa 0 658 62 78 0 (0) _
GRMZM5G830776_P01 3.21 Zea mays 0 648 62 78 3 (3) _
Zm00001eb377900_P002 agpv5 Zea mays 0 646 60 76 0 (0) _
v1_GRMZM2G468525_P01 4a53 Zea mays 0 531 59 75 3 (2) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Sec1(1)
TargetP:	Cytoplasm (Class 4 C0.294; M0.142; S0.109; _0.627)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	666 aa (-cTP 612)
Molecular Weight	75.08 kDA(-cTP )
PI	7.98(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1402	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
17317660(Plasma Membrane proteome)
18463617(suspension cells-phosphorylated proteins)
18931141(peroxisomes- high&low purity (cell culture))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data