PPDB

 The Plant Proteome Database

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AT1G12350.1   4-phospho-panto-thenoylcysteine synthetase
Lab Annot. DNA/panthothenate metabolism flavoprotein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G12350.2 11Arabidopsis thaliana03171001000 (0)C
AT5G02080.5 11Arabidopsis thaliana031688910 (0)_
AT5G02080.7 11Arabidopsis thaliana030889920 (0)_
Os02g36550.1 7Oryza sativa8E-131307607511 (11)_
Os08g07880.1 7Oryza sativa7E-12730659750 (0)_
Zm00001eb182920_P001 agpv5Zea mays5E-12430457740 (0)_
GRMZM2G002173_P03 3.21Zea mays5E-12430457744 (4)_
v1_GRMZM2G002173_P03 4a53Zea mays5E-12430457742 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DFP(2) NmrA(3)
TargetP: Chloroplast (Class 5 C0.758; M0.031; S0.096; _0.561)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 317 aa (-cTP 267)
Molecular Weight 35.37 kDA(-cTP 29.85)
PI 7.54(-cTP 8.60)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1414Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR2 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
2219Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep
2300Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)

Comparative Proteomics Data

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