PPDB

PPDB	The Plant Proteome Database

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AT1G12040.1 leucine-rich repeat/extensin 1

Lab Annot.

Mapman: 10.5.3 cell wall.cell wall proteins.LRR

Curated Location

TAIR curated location: cell wall (sensu Magnoliophyta)11331608

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G62440.1 11 Arabidopsis thaliana 0 375 82 88 0 (0) S
AT3G24480.1 11 Arabidopsis thaliana 2E-150 351 60 74 0 (0) S
AT4G13340.1 11 Arabidopsis thaliana 2E-145 341 62 75 4 (4) S
Os02g04540.1 7 Oryza sativa 7E-135 338 60 74 0 (0) S
Os06g49100.1 7 Oryza sativa 4E-133 334 59 75 0 (0) S
Os11g43640.1 7 Oryza sativa 4E-122 360 50 68 0 (0) M
v1_GRMZM2G034550_P01 4a53 Zea mays 8E-135 386 55 68 11 (10) C
GRMZM5G805485_P01 3.21 Zea mays 2E-134 338 59 73 3 (3) C
Zm00001eb231880_P001 agpv5 Zea mays 2E-134 386 55 68 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Extensin_2(2) LRR_1(5) LRR_4(3) LRR_6(5) LRR_8(5) LRRNT_2(1)
TargetP:	Secreted (Class 1 C0.002; M0.033; S0.967; _0.090)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	744 aa (-cTP 656)
Molecular Weight	80.99 kDA(-cTP )
PI	8.42(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
325	Detail								BY2 cell suspension [Tobacco]	cell wall enriched	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)

Comparative Proteomics Data