PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G11990.1   O-fucosyltransferase family protein

Lab Annot. O-fucosyltransferase
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G11990.2 11Arabidopsis thaliana062791910 (0)_
AT1G62330.1 11Arabidopsis thaliana067067753 (3)_
AT1G29200.4 11Arabidopsis thaliana8E-18049255690 (0)_
Os06g35410.1 7Oryza sativa2E-17755950660 (0)_
Os02g06400.1 7Oryza sativa1E-9844837570 (0)C
Os06g13215.1 7Oryza sativa3E-9521768820 (0)_
Zm00001eb280000_P004 agpv5Zea mays042166780 (0)M
v1_GRMZM2G408703_P01 4a53Zea mays046959713 (3)C
GRMZM2G408703_P01 3.21Zea mays046959710 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: O-FucT(1)
TargetP: Cytoplasm (Class 2 C0.010; M0.178; S0.030; _0.965)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 2 TMs
TAT position:
Length 590 aa (-cTP 540)
Molecular Weight 67.31 kDA(-cTP )
PI 9.38(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1455Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)
1459Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help