PPDB

PPDB	The Plant Proteome Database

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AT1G11920.1 Pectin lyase-like superfamily protein

Lab Annot.

Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G22080.1 11 Arabidopsis thaliana 0 392 68 79 0 (0) S
AT4G22090.1 11 Arabidopsis thaliana 0 392 69 79 0 (0) S
AT1G30350.1 11 Arabidopsis thaliana 0 384 70 79 0 (0) S
Os04g05050.2 7 Oryza sativa 1E-150 350 59 74 0 (0) _
Os04g05050.1 7 Oryza sativa 1E-149 350 59 74 0 (0) S
Os10g31910.1 7 Oryza sativa 7E-137 347 56 70 0 (0) S
v1_GRMZM2G412207_P02 4a53 Zea mays 3E-153 350 60 74 0 (0) _
GRMZM2G412207_P04 3.21 Zea mays 5E-152 350 60 74 0 (0) C
Zm00001eb420010_P001 agpv5 Zea mays 5E-152 350 60 74 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Beta_helix(1) NosD(1) Pectate_lyase_4(1)
TargetP:	Secreted (Class 1 C0.041; M0.013; S0.956; _0.043)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	384 aa (-cTP 363)
Molecular Weight	42.69 kDA(-cTP )
PI	9.33(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data