PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G11370.1 Pectin lyase-like superfamily protein

Lab Annot.

Mapman: 10.8.1 cell wall.pectin*esterases.PME

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G11580.1 11 Arabidopsis thaliana 3E-118 274 60 74 62 (29) S
AT1G11580.2 11 Arabidopsis thaliana 7E-118 274 60 74 0 (0) _
AT1G11590.1 11 Arabidopsis thaliana 2E-105 251 58 78 1 (1) S
Os08g34900.1 7 Oryza sativa 6E-91 252 54 69 0 (0) S
Os01g57854.1 7 Oryza sativa 7E-91 244 53 70 0 (0) M
Os07g47830.1 7 Oryza sativa 3E-88 243 53 69 0 (0) S
v1_GRMZM2G175499_P01 4a53 Zea mays 1E-88 255 52 68 0 (0) S
Zm00001eb177120_P001 agpv5 Zea mays 1E-88 255 52 68 0 (0) S
GRMZM2G175499_P01 3.21 Zea mays 1E-88 255 52 68 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4516(2) Pectate_lyase_3(1) Pectinesterase(1)
TargetP:	Secreted (Class 1 C0.010; M0.021; S0.994; _0.017)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	288 aa (-cTP 259)
Molecular Weight	31.40 kDA(-cTP )
PI	6.38(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data