PPDB

 The Plant Proteome Database

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AT1G11190.1   bifunctional nuclease i
Lab Annot.
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G21585.1 11Arabidopsis thaliana1E-10930352671 (0)S
AT4G21585.4 11Arabidopsis thaliana1E-10930352670 (0)S
AT1G68290.1 11Arabidopsis thaliana5E-10628451700 (0)S
Os04g54390.1 7Oryza sativa2E-15027469810 (0)S
Os01g03730.1 7Oryza sativa6E-9729147660 (0)M
Os01g03740.1 7Oryza sativa5E-9526850640 (0)S
v1_GRMZM2G168744_P01 4a53Zea mays2E-15328168821 (1)S
GRMZM2G168744_P01 3.21Zea mays2E-15328168822 (2)S
Zm00001eb043930_P001 agpv5Zea mays2E-15328168820 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF4635(2) S1-P1_nuclease(1)
TargetP: Secreted (Class 3 C0.015; M0.342; S0.892; _0.009)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 305 aa (-cTP 283)
Molecular Weight 34.88 kDA(-cTP )
PI 6.08(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help