PPDB

 The Plant Proteome Database

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AT1G11180.1   Secretory carrier membrane protein (SCAMP) family protein
Lab Annot.
Mapman: 34.99 transport.misc
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G11180.3 11Arabidopsis thaliana029197970 (0)_
AT1G11180.2 11Arabidopsis thaliana030493931 (1)_
AT1G61250.1 11Arabidopsis thaliana0291849013 (13)_
Os07g37740.1 7Oryza sativa4E-15331267800 (0)_
Os01g57220.1 7Oryza sativa3E-14529171840 (0)_
Os05g42330.1 7Oryza sativa7E-138290708417 (17)_
GRMZM2G041181_P01 3.21Zea mays4E-15431168801 (1)_
Zm00001eb324430_P001 agpv5Zea mays4E-15431168800 (0)_
v1_GRMZM2G041181_P01 4a53Zea mays4E-15431168801 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: RNase_Y_N(1) SCAMP(1)
TargetP: Cytoplasm (Class 2 C0.184; M0.161; S0.047; _0.837)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 291 aa (-cTP 265)
Molecular Weight 32.63 kDA(-cTP )
PI 9.26(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help