PPDB

 The Plant Proteome Database

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AT1G11020.1   RING/FYVE/PHD zinc finger superfamily protein
Lab Annot. RING/FYVE/PHD zinc finger protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G22120.2 11Arabidopsis thaliana9E-5830342520 (0)_
AT2G22120.1 11Arabidopsis thaliana1E-5730341520 (0)_
AT1G50440.2 11Arabidopsis thaliana3E-4432235460 (0)_
Os08g29590.1 7Oryza sativa7E-16230675830 (0)_
Os01g42500.1 7Oryza sativa5E-13826373850 (0)_
Os11g39130.1 7Oryza sativa1E-5531540520 (0)_
GRMZM2G044569_P04 3.21Zea mays4E-15831174830 (0)_
GRMZM2G044569_P03 3.21Zea mays4E-15831174830 (0)_
GRMZM2G044569_P06 3.21Zea mays4E-15831174830 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF4191(2) DUF997(2) RINGv(1) Sigma_reg_N(2) Yip1(1)
TargetP: Cytoplasm (Class 4 C0.371; M0.195; S0.061; _0.637)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 3 TMs
TAT position:
Length 321 aa (-cTP 286)
Molecular Weight 35.99 kDA(-cTP )
PI 5.54(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help