PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G10910.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

plastid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G10910.2 11 Arabidopsis thaliana 0 585 100 100 0 (0) C
AT1G74850.1 11 Arabidopsis thaliana 1E-42 414 25 48 164 (135) C
AT2G31400.1 11 Arabidopsis thaliana 3E-38 329 26 54 0 (0) C
Os01g37870.4 7 Oryza sativa 0 605 55 76 0 (0) C
Os01g37870.3 7 Oryza sativa 0 605 55 76 0 (0) C
Os01g37870.2 7 Oryza sativa 0 605 55 76 0 (0) C
v1_GRMZM2G176419_P01 4a53 Zea mays 0 550 51 71 14 (14) C
Zm00001eb162220_P002 agpv5 Zea mays 0 618 54 74 0 (0) C
Zm00001eb162220_P005 agpv5 Zea mays 0 618 54 74 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3368(2) ECSIT(4) HTH_56(2) PPR(11) PPR_1(8) PPR_2(11) PPR_3(7) PPR_long(3) RP
TargetP:	Chloroplast (Class 4 C0.463; M0.257; S0.008; _0.208)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	664 aa (-cTP 592)
Molecular Weight	75.10 kDA(-cTP 67.37)
PI	9.12(-cTP 9.03)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1178	Detail								leaf [A. thaliana]	co-IP RH3 stroma	clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data