PPDB

PPDB	The Plant Proteome Database

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AT1G10780.1 F-box/RNI-like superfamily protein

Lab Annot.

F-box/RNI-like protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G10780.2 11 Arabidopsis thaliana 0 418 100 100 0 (0) _
AT1G67190.1 11 Arabidopsis thaliana 4E-07 216 24 48 3 (1) _
AT1G67190.2 11 Arabidopsis thaliana 4E-07 216 24 48 3 (1) _
Os09g28120.1 7 Oryza sativa 4E-156 420 53 71 0 (0) _
Os08g36570.1 7 Oryza sativa 1E-145 421 50 69 0 (0) _
Os01g64030.4 7 Oryza sativa 5E-07 195 24 48 0 (0) _
Zm00001eb100430_P002 agpv5 Zea mays 3E-157 419 53 72 0 (0) M
GRMZM2G005486_P01 3.21 Zea mays 3E-157 419 53 72 0 (0) M
v1_GRMZM2G005486_P01 4a53 Zea mays 3E-157 419 53 72 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4252(1) DUF4806(1) F-box(1) F-box-like(1) F-box_5(1) LRR_4(5)
TargetP:	Cytoplasm (Class 3 C0.091; M0.048; S0.120; _0.598)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	418 aa (-cTP 400)
Molecular Weight	47.40 kDA(-cTP )
PI	6.15(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)

Comparative Proteomics Data