PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G10700.1 phosphoribosyl pyrophosphate (PRPP) synthase 3

Lab Annot.

ribose-phosphate pyrophosphokinase 3 / phosphoribosyl diphosphate synthetase 3 (PRS3)
Mapman: 23.1.3 nucleotide metabolism.synthesis.PRS-PP

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G10700.2 11 Arabidopsis thaliana 0 291 100 100 0 (0) C
AT2G42910.1 11 Arabidopsis thaliana 6E-173 313 73 83 174 (135) _
AT2G35390.2 11 Arabidopsis thaliana 5E-19 324 25 47 129 (45) C
Os01g52530.1 7 Oryza sativa 0 345 74 84 2 (2) C
Os02g48390.1 7 Oryza sativa 5E-168 316 72 84 26 (26) _
Os06g41360.3 7 Oryza sativa 2E-17 295 26 44 0 (0) C
Zm00001eb154480_P001 agpv5 Zea mays 0 326 75 86 0 (0) C
Zm00001eb154480_P002 agpv5 Zea mays 0 326 75 86 0 (0) C
Zm00001eb252660_P001 agpv5 Zea mays 7E-170 316 73 84 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Pribosyl_synth(1) Pribosyltran(1) Pribosyltran_N(2)
TargetP:	Chloroplast (Class 1 C0.924; M0.041; S0.004; _0.062)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	411 aa (-cTP 372)
Molecular Weight	44.70 kDA(-cTP 40.83)
PI	8.08(-cTP 7.59)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1175	Detail								leaf [A. thaliana]	co-IP RH3 stroma	wild-type
1178	Detail								leaf [A. thaliana]	co-IP RH3 stroma	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1453	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1454	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 2)
1525	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1528	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1932	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
1944	Detail								leaf [A. thaliana]	stroma UVR stroma	UVR
2291	Detail								[A. thaliana]		Clp C1 TRAP
2300	Detail								[A. thaliana]		Clp C1 TRAP
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane
2400	Detail								leaf-soluble [A. thaliana]	GFP-nano-trap	wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))
21515685(GreenCut2)

Comparative Proteomics Data