PPDB

 The Plant Proteome Database

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AT1G10640.1   Pectin lyase-like superfamily protein
Lab Annot.
Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G60590.1 11Arabidopsis thaliana054774840 (0)M
AT5G14650.1 11Arabidopsis thaliana5E-17641758690 (0)S
AT3G26610.1 11Arabidopsis thaliana3E-13346945600 (0)S
Os01g44970.1 7Oryza sativa053354660 (0)S
Os01g45060.1 7Oryza sativa7E-15635361730 (0)M
Os06g28670.1 7Oryza sativa1E-13843547610 (0)M
GRMZM2G037431_P01 3.21Zea mays054954650 (0)S
Zm00001eb158930_P001 agpv5Zea mays054954650 (0)S
v1_GRMZM2G037431_P01 4a53Zea mays054954650 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Glyco_hydro_28(2) Pectate_lyase_3(2)
TargetP: Mitochondria (Class 5 C0.003; M0.389; S0.361; _0.008)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 532 aa (-cTP 514)
Molecular Weight 58.35 kDA(-cTP )
PI 8.87(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help