PPDB

 The Plant Proteome Database

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AT1G10590.1   Nucleic acid-binding%2C OB-fold-like protein
Lab Annot. DNA-binding protein-related
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G10590.2 11Arabidopsis thaliana3E-10013910010043 (30)_
AT1G10590.3 11Arabidopsis thaliana3E-10013910010041 (28)S
AT1G23750.1 11Arabidopsis thaliana2E-7013872890 (0)_
Os05g01050.2 7Oryza sativa2E-67133718619 (19)_
Os05g01050.1 7Oryza sativa2E-67133718619 (19)_
Os05g01050.3 7Oryza sativa2E-6713371869 (9)_
GRMZM2G073622_P03 3.21Zea mays4E-65137698548 (46)_
Zm00001eb362020_P001 agpv5Zea mays4E-6513769850 (0)_
v1_GRMZM2G073622_P03 4a53Zea mays4E-65137698541 (40)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: tRNA_anti(1)
TargetP: Cytoplasm (Class 5 C0.480; M0.052; S0.020; _0.607)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 139 aa (-cTP 105)
Molecular Weight 15.45 kDA(-cTP )
PI 6.60(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1567Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3
1596Detail        [A. thaliana]  
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2245Detail       seedlings [A. thaliana] total tissue wild-type
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 15815986(Silique)
15815986(Leaf)
17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
19525416(leaf (wt and clpr4-1 mutant))
20706207(contaminants cell cycle interactome (cell culture))
19508356(mature pollen grains and pollen tubes)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data

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