PPDB

The Plant Proteome Database

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AT1G10580.1   Transducin/WD40 repeat-like superfamily protein

Lab Annot. transducin protein / WD-40 repeat protein
Mapman: 27.1 RNA.processing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G54520.1 11Arabidopsis thaliana4E-5531233530 (0)_
AT3G49660.1 11Arabidopsis thaliana2E-2931025460 (0)C
AT5G64730.1 11Arabidopsis thaliana2E-2630927460 (0)_
Os03g27970.2 6Oryza sativa058171831 (1)_
Os03g27970.1 7Oryza sativa058071832 (2)_
Os02g21490.1 7Oryza sativa5E-4931231530 (0)_
Zm00001eb019350_P002 agpv5Zea mays058270800 (0)C
v1_AC217887.3_FGP005 4a53Zea mays052771828 (8)C
GRMZM2G085825_P01 3.21Zea mays058370800 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(5) B12D(1) eIF2A(3) PQQ_2(2) RR_TM4-6(1) WD40(7)
TargetP: Cytoplasm (Class 3 C0.304; M0.088; S0.106; _0.780)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 573 aa (-cTP 529)
Molecular Weight 65.13 kDA(-cTP )
PI 6.61(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help