PPDB

PPDB	The Plant Proteome Database

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AT1G10560.1 plant U-box 18

Lab Annot.

plant U-box 18
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G60190.1 11 Arabidopsis thaliana 0 701 64 77 0 (0) C
AT1G29340.1 11 Arabidopsis thaliana 3E-61 700 27 48 1 (1) C
AT5G01830.1 11 Arabidopsis thaliana 2E-56 691 25 46 0 (0) C
Os08g32060.1 7 Oryza sativa 1E-120 678 35 54 0 (0) _
Os09g21120.1 7 Oryza sativa 9E-103 682 36 56 0 (0) C
Os01g60860.1 7 Oryza sativa 1E-54 440 31 53 0 (0) C
GRMZM2G315431_P01 3.21 Zea mays 1E-124 680 36 57 0 (0) _
Zm00001eb311590_P001 agpv5 Zea mays 1E-124 680 36 57 0 (0) _
v1_GRMZM2G315431_P01 4a53 Zea mays 1E-124 680 36 57 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Arm(4) DUF3361(3) U-box(1) zf-C3HC4_4(1) zf-NOSIP(1) zf-Nse(1) zf-RING_UBOX(1)
TargetP:	Cytoplasm (Class 3 C0.098; M0.185; S0.048; _0.585)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	697 aa (-cTP 653)
Molecular Weight	76.99 kDA(-cTP )
PI	8.91(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data