PPDB

 The Plant Proteome Database

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AT1G10510.1   RNI-like superfamily protein
Lab Annot. unknown protein similar to ribonuclease inhibitors
Mapman: 33.99 development.unspecified
Curated Location plastid (Pubmed: 23198870 )

TAIR curated location: chloroplast envelope12775770
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G63130.1 11Arabidopsis thaliana1E-23274294832 (24)C
AT3G63130.2 11Arabidopsis thaliana1E-23274294831 (23)C
AT5G19320.1 11Arabidopsis thaliana8E-2127528481 (1)_
Os06g13050.1 7Oryza sativa050663826 (6)S
Os05g46560.1 7Oryza sativa5E-23275295046 (46)_
Os05g46560.2 7Oryza sativa5E-23275295046 (46)_
Zm00001eb371900_P001 agpv5Zea mays054360780 (0)C
v1_GRMZM2G110289_P01 4a53Zea mays0543607816 (16)C
GRMZM2G110289_P01 3.21Zea mays0543607833 (23)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: LRR_1(7) LRR_4(10) LRR_6(14) LRR_8(8)
TargetP: Chloroplast (Class 2 C0.828; M0.083; S0.006; _0.142)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 605 aa (-cTP 545) (-lTP 502)
Molecular Weight 64.72 kDA(-cTP 58.21)(-lTP 53.77)
PI 7.18(-cTP 5.77)(-lTP 5.482)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
342Detail       leaf [A. thaliana] chloroplast low density membranewild-type
343Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
876Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
877Detail       leaf [A. thaliana] chloroplast stromawild-type
1260Detail       leaf [A. thaliana] co-IP SHOOT1 (rep. 1) thylakoid membranewild-type
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1627Detail       Rosettes [A. thaliana] total leaf tissue thylakoid + envelopeWild-type
1983Detail       leaf [A. thaliana] plastid wild-type
1984Detail       leaf [A. thaliana] plastid wild-type
1985Detail       leaf [A. thaliana] plastid wild-type
1988Detail       leaf [A. thaliana] plastid Prep1_Prep2
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2246Detail       seedlings [A. thaliana] total tissue gfs9
2251Detail       seedlings [A. thaliana] total tissue wild-type
2269Detail       seedlings [A. thaliana] total tissue wild-type
2316Detail       leaf [A. thaliana] PG plastoglobule 
2317Detail       leaf [A. thaliana] PG plastoglobule 
2318Detail       leaf [A. thaliana] PG plastoglobule 
2319Detail       leaf [A. thaliana] PG plastoglobule 
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

 12938931(Total chloroplast envelope)
12766230(Total chloroplast envelope)
16618929(MITO/PLASTID-LOPIT-callus)
18431481(chloroplast)
19995728(proplastid (Brassica napus))
19525416(leaf (wt and clpr4-1 mutant))
19888209(80S polysomal fraction)
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)

Comparative Proteomics Data

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