PPDB

The Plant Proteome Database

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AT1G10500.1   chloroplast-localized ISCA-like protein

Lab Annot. cpIscA - 2Fe-2S assembly factor
Mapman: 29.8.1* protein assembly and cofactor ligation.Fe-S assembly
Curated Location plastid stroma (Pubmed: 23198870 15888686 18431481 )

TAIR curated location: chloroplast stroma15888686
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G03905.1 11Arabidopsis thaliana6E-1811135532 (0)M
AT2G16710.3 11Arabidopsis thaliana9E-1812030571 (1)M
AT2G16710.1 11Arabidopsis thaliana2E-1711432581 (1)M
Os06g05400.1 7Oryza sativa2E-6511080920 (0)C
Os01g01610.1 7Oryza sativa4E-1810835600 (0)M
Os12g30030.1 7Oryza sativa1E-1710835600 (0)C
Zm00001eb377130_P001 agpv5Zea mays2E-6611081920 (0)C
GRMZM2G050971_P01 3.21Zea mays2E-6611081920 (0)C
v1_GRMZM2G050971_P01 4a53Zea mays2E-6611081920 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Fe-S_biosyn(2)
TargetP: Chloroplast (Class 1 C0.960; M0.038; S0.006; _0.068)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 180 aa (-cTP 125)
Molecular Weight 19.34 kDA(-cTP 13.35)
PI 8.57(-cTP 5.04)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1459Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 2)
1461Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 1)
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)
1465Detail       leaf [A. thaliana] co-IP GST-ClpS stroma clpc1 x clps (rep. 1)
1482Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 1)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
2112Detail       leaf [A. thaliana] Stroma stromawt
2113Detail       leaf [A. thaliana] Stroma stromawt

* For details about the exprimental sources click here.

Published Proteomics Data

19995723(chloroplast reference proteome)

Comparative Proteomics Data


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