PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G10480.1 zinc finger protein 5

Lab Annot.

Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G67030.1 11 Arabidopsis thaliana 8E-17 199 34 48 0 (0) _
AT1G68360.1 11 Arabidopsis thaliana 2E-14 181 32 44 1 (1) _
AT5G06650.1 11 Arabidopsis thaliana 3E-12 96 37 56 0 (0) _
Os01g32920.1 7 Oryza sativa 3E-13 81 44 60 0 (0) _
Os09g27320.1 7 Oryza sativa 7E-12 105 36 50 0 (0) _
Os02g53530.1 7 Oryza sativa 1E-10 107 34 48 0 (0) _
Zm00001eb380490_P001 agpv5 Zea mays 1E-13 85 42 60 0 (0) _
v1_GRMZM2G703281_P01 4a53 Zea mays 1E-12 159 32 43 0 (0) C
Zm00001eb100360_P001 agpv5 Zea mays 2E-12 159 32 43 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF5570(1) PyrI_C(2) zf-C2H2(1) zf-C2H2_2(1) zf-C2H2_3rep(1) zf-C2H2_4(1) zf-C2H
TargetP:	Chloroplast (Class 4 C0.777; M0.047; S0.047; _0.482)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	211 aa (-cTP 170)
Molecular Weight	23.59 kDA(-cTP 19.27)
PI	9.06(-cTP 9.10)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data