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AT1G10390.1
Nucleoporin autopeptidase
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| Lab Annot. |
Nucleoporin Nup98a
Mapman: 29.5.5.9* protein.degradation.serine protease SP.S59 |
| Curated Location |
nucleus (Pubmed: 21189294 )
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
Nucleoporin2(1) |
| TargetP: |
Chloroplast (Class 2 C0.883; M0.079; S0.001; _0.090) |
| Predotar: |
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| Subcel. Location: |
Stroma |
| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
1041 aa (-cTP 993) |
| Molecular Weight |
106.31 kDA(-cTP 101.52) |
| PI |
8.85(-cTP 8.86) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 1394 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1402 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | wild-type |
| 1404 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | wild-type |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1418 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 3) |
| 1531 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 40 uM CAP | wild-type (rep. 1) |
| 2320 | Detail | | | | | | | | [A. thaliana] | Thylakoids plastoglobule | |
| 2324 | Detail | | | | | | | | leaf [A. thaliana] | THYLAKOIDS thylakoid membrane | |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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19525416(leaf (wt and clpr4-1 mutant))
20706207(contaminants cell cycle interactome (cell culture))
19114538(guard cells Arabidopsis leaf)
21173025(root proteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)
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Comparative Proteomics Data
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