PPDB

 The Plant Proteome Database

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AT1G10310.1   NAD(P)-binding Rossmann-fold superfamily protein
Lab Annot. NAD(P)-binding Rossmann-fold protein
Mapman: 26.22 misc.short chain dehydrogenase/reductase (SDR)
Curated Location plastid stroma (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G55290.2 11Arabidopsis thaliana2E-1719632551 (1)_
AT3G55290.1 11Arabidopsis thaliana2E-1719632551 (1)_
AT3G55310.1 11Arabidopsis thaliana2E-1719732571 (1)_
Os02g35170.1 7Oryza sativa2E-11322567840 (0)C
Os02g35170.2 7Oryza sativa3E-10320366850 (0)C
Os11g25700.1 7Oryza sativa4E-1719433530 (0)C
v1_GRMZM2G128146_P01 4a53Zea mays3E-11522468842 (2)C
Zm00001eb243890_P001 agpv5Zea mays3E-11522468840 (0)C
GRMZM2G128146_P01 3.21Zea mays3E-115224688413 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: adh_short(1) adh_short_C2(1) ApbA(1) DUF1776(1) Epimerase(1) F420_oxidored(1) GD
TargetP: Chloroplast (Class 3 C0.660; M0.108; S0.031; _0.076)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 242 aa (-cTP 239)
Molecular Weight 25.32 kDA(-cTP 24.95)
PI 8.44(-cTP 8.48)

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1455Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)
1457Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)
1459Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 2)
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2302Detail        [A. thaliana] Clp C1 WT
2303Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 21311031(mitochondria)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help