PPDB

The Plant Proteome Database

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AT1G10270.1   glutamine-rich protein 23

Lab Annot. GRP23 (GLUTAMINE-RICH PROTEIN23)
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G49240.1 11Arabidopsis thaliana8E-91619345170 (40)M
AT3G60960.1 11Arabidopsis thaliana3E-7840240560 (0)M
AT3G60960.3 11Arabidopsis thaliana3E-7840240560 (0)M
Os05g30240.1 7Oryza sativa6E-16152653713 (3)M
Os11g24570.1 7Oryza sativa4E-9052336572 (2)M
Os05g45760.1 7Oryza sativa5E-5148729500 (0)M
v1_GRMZM2G164018_P02 4a53Zea mays3E-14475342583 (3)M
GRMZM2G164018_P02 3.21Zea mays3E-14475342582 (2)M
Zm00001eb047560_P002 agpv5Zea mays3E-14475342580 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BTAD(3) Clathrin(3) OPA3(2) PPR(10) PPR_1(8) PPR_2(9) PPR_3(3) PPR_long(4) RPN7(
TargetP: Mitochondria (Class 2 C0.048; M0.834; S0.006; _0.142)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 913 aa (-cTP 899)
Molecular Weight 102.09 kDA(-cTP )
PI 7.33(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
20706207(contaminants cell cycle interactome (cell culture))
21311031(mitochondria)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help