PPDB

PPDB	The Plant Proteome Database

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AT1G09920.1 TRAF-type zinc finger-like protein

Lab Annot.

Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G15420.2 11 Arabidopsis thaliana 1E-15 160 29 43 0 (0) _
AT4G15420.1 11 Arabidopsis thaliana 1E-12 160 29 43 0 (0) _
Os03g24184.1 7 Oryza sativa 5E-66 191 54 67 0 (0) C
Os07g46390.1 7 Oryza sativa 2E-56 190 43 63 0 (0) _
Os07g46390.2 7 Oryza sativa 3E-53 182 43 64 0 (0) _
Zm00001eb017320_P001 agpv5 Zea mays 2E-71 188 58 70 0 (0) _
GRMZM2G115921_P01 3.21 Zea mays 2E-71 188 58 70 0 (0) _
v1_GRMZM2G115921_P01 4a53 Zea mays 2E-71 188 58 70 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2318(2) PRP21_like_P(2) SR1P(3) XAF1_C(4) zf-FPG_IleRS(3) zf-TRAF(3) zf-UDP(2
TargetP:	Cytoplasm (Class 2 C0.180; M0.084; S0.104; _0.888)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	192 aa (-cTP 181)
Molecular Weight	21.85 kDA(-cTP )
PI	7.52(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data