PPDB

The Plant Proteome Database

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AT1G09850.1   xylem bark cysteine peptidase 3

Lab Annot. xylem BARK papain-like cysteine protease 3 (XBCP3)
Mapman: 29.5.3.1.1* protein.degradation.cysteine protease.CA.C1
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G43060.1 11Arabidopsis thaliana5E-1474365062105 (59)S
AT1G47128.1 11Arabidopsis thaliana3E-1434514761827 (456)S
AT3G19390.1 11Arabidopsis thaliana1E-142426506414 (3)S
Os05g43230.1 7Oryza sativa3E-17339164760 (0)S
Os04g57440.1 7Oryza sativa3E-124408486211 (11)S
Os04g57490.1 7Oryza sativa2E-11537848630 (0)S
GRMZM2G006377_P01 3.21Zea mays042663741 (0)S
Zm00001eb292310_P004 agpv5Zea mays042663740 (0)S
Zm00001eb292310_P003 agpv5Zea mays042663740 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Granulin(1) Inhibitor_I29(1) Peptidase_C1(1) Peptidase_C1_2(2)
TargetP: Secreted (Class 1 C0.007; M0.006; S0.985; _0.065)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 437 aa (-cTP 417)
Molecular Weight 48.07 kDA(-cTP )
PI 6.02(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1613Detail       Natural Senescence leaf [A. thaliana]  
1614Detail       Natural Senescence leaf [A. thaliana]  
1616Detail       Natural Senescence leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
19546170(mature pollen grains)
17216043(leaf)
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help