PPDB

PPDB	The Plant Proteome Database

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AT1G09820.1 Pentatricopeptide repeat (PPR-like) superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G39710.1 11 Arabidopsis thaliana 1E-82 596 28 50 0 (0) M
AT2G15630.1 11 Arabidopsis thaliana 1E-80 592 30 50 0 (0) M
AT3G22470.1 11 Arabidopsis thaliana 2E-77 528 28 51 2 (2) M
Os10g34310.2 7 Oryza sativa 3E-140 447 45 68 0 (0) M
Os10g34310.1 7 Oryza sativa 3E-140 447 45 68 0 (0) M
Os06g05920.1 7 Oryza sativa 1E-77 458 31 55 0 (0) C
GRMZM5G818978_P02 3.21 Zea mays 1E-128 490 42 65 0 (0) M
Zm00001eb121820_P001 agpv5 Zea mays 3E-93 492 36 56 0 (0) M
GRMZM5G818978_P01 3.21 Zea mays 1E-90 451 37 58 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATE_N(2) ECSIT(3) MRP-S27(6) Mtf2(4) PPR(13) PPR_1(11) PPR_2(11) PPR_3(9) PPR_lo
TargetP:	Chloroplast (Class 5 C0.554; M0.551; S0.026; _0.052)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	606 aa (-cTP 578) (-lTP 492)
Molecular Weight	68.05 kDA(-cTP 65.03)(-lTP 55.36)
PI	8.86(-cTP 8.52)(-lTP 8.800)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data