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AT1G09570.2 phytochrome A

Lab Annot.

phytochrome A
Mapman: 30.11 signalling.light

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G09570.3 11 Arabidopsis thaliana 0 1014 100 100 0 (0) C
AT1G09570.4 11 Arabidopsis thaliana 0 1014 100 100 0 (0) M
AT1G09570.5 11 Arabidopsis thaliana 0 1014 100 100 0 (0) M
Os03g51030.1 7 Oryza sativa 0 1015 63 81 0 (0) M
Os03g51030.3 7 Oryza sativa 0 1015 63 81 0 (0) M
Os03g51030.2 7 Oryza sativa 0 1015 63 81 0 (0) M
Zm00001eb055460_P004 agpv5 Zea mays 0 1010 63 81 0 (0) M
Zm00001eb055460_P001 agpv5 Zea mays 0 1010 63 81 0 (0) M
Zm00001eb055460_P003 agpv5 Zea mays 0 1010 63 81 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	GAF(1) HATPase_c(2) HisKA(1) PAS(2) PAS_2(2) PAS_3(2) PAS_4(2) PAS_8(2) PAS_9(2)
TargetP:	Cytoplasm (Class 4 C0.419; M0.047; S0.029; _0.665)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1014 aa (-cTP 961)
Molecular Weight	112.62 kDA(-cTP )
PI	5.77(-cTP )

Experimental Evidence

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View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2236	Detail								seedlings [A. thaliana]	total tissue	gfs9
2245	Detail								seedlings [A. thaliana]	total tissue	wild-type
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2254	Detail								leaf [A. thaliana]	total seedlings	gfs9
2255	Detail								leaf [A. thaliana]	total seedlings	gfs9
2256	Detail								leaf [A. thaliana]	total seedlings	gfs9
2258	Detail								leaf [A. thaliana]	total seedlings	gfs9
2259	Detail								leaf [A. thaliana]	total seedlings	gfs9
2269	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data