PPDB

 The Plant Proteome Database

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AT1G09570.1   phytochrome A
Lab Annot. phytochrome A
Mapman: 30.11 signalling.light
Curated Location
TAIR curated location: nuclear body & nucleus & cytoplasm12119377,16332538
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G09570.4 11Arabidopsis thaliana011221001000 (0)M
AT1G09570.3 11Arabidopsis thaliana011221001000 (0)C
AT1G09570.5 11Arabidopsis thaliana011221001000 (0)M
Os03g51030.1 7Oryza sativa0113063800 (0)M
Os03g51030.3 7Oryza sativa0113063800 (0)M
Os03g51030.2 7Oryza sativa0113063800 (0)M
Zm00001eb055460_P004 agpv5Zea mays0110163810 (0)M
Zm00001eb055460_P001 agpv5Zea mays0110163810 (0)M
Zm00001eb055460_P003 agpv5Zea mays0110163810 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: GAF(1) HATPase_c(2) HisKA(1) PAS(2) PAS_2(2) PAS_3(2) PAS_4(2) PAS_8(2) PAS_9(2)
TargetP: Mitochondria (Class 5 C0.421; M0.592; S0.025; _0.119)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1122 aa (-cTP 1115)
Molecular Weight 124.50 kDA(-cTP )
PI 5.91(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2236Detail       seedlings [A. thaliana] total tissue gfs9
2237Detail       seedlings [A. thaliana] total tissue gfs9
2238Detail       seedlings [A. thaliana] total tissue gfs9
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2254Detail       leaf [A. thaliana] total seedlings gfs9
2255Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9
2258Detail       leaf [A. thaliana] total seedlings gfs9
2259Detail       leaf [A. thaliana] total seedlings gfs9
2268Detail       seedlings [A. thaliana] total tissue wild-type
2269Detail       seedlings [A. thaliana] total tissue wild-type
2270Detail       seedlings [A. thaliana] total tissue wild-type
2271Detail       seedlings [A. thaliana] total tissue wild-type
2272Detail       seedlings [A. thaliana] total tissue wild-type
2273Detail       seedlings [A. thaliana] total tissue wild-type
2274Detail       seedlings [A. thaliana] total tissue wild-type
2275Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

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