PPDB

The Plant Proteome Database

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AT1G09530.1   phytochrome interacting factor 3

Lab Annot. PIF3 - phytochrome-interacting factor 3
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location nucleus (Pubmed: 19380736 )

TAIR curated location: nucleus9845368
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G09530.2 11Arabidopsis thaliana05241001000 (0)_
AT1G09530.3 11Arabidopsis thaliana05241001000 (0)_
AT1G09530.5 11Arabidopsis thaliana05241001000 (0)_
Os01g18290.1 6Oryza sativa4E-3749030430 (0)_
Os01g18290.2 6Oryza sativa6E-3749230420 (0)_
Os03g56950.7 7Oryza sativa5E-3615457680 (0)_
GRMZM2G387528_P02 3.21Zea mays4E-4148232430 (0)_
Zm00001eb332400_P001 agpv5Zea mays4E-4148232430 (0)_
GRMZM2G062541_P01 3.21Zea mays7E-3815157660 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HLH(1) Svs_4_5_6(2)
TargetP: Cytoplasm (Class 5 C0.288; M0.174; S0.015; _0.381)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 524 aa (-cTP 464)
Molecular Weight 56.99 kDA(-cTP )
PI 6.11(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help