PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G09300.1   Metallopeptidase M24 family protein

Lab Annot. ICP55 (functional homolog of yeast & human ICP55)
Mapman: 29.5.7.6.1* protein.degradation.metalloprotease.MG.M24
Curated Location mitochondria (Pubmed: 25732537 25862457 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G09300.2 11Arabidopsis thaliana045599993 (3)_
AT4G29490.1 11Arabidopsis thaliana2E-43473254516 (13)C
AT3G05350.1 11Arabidopsis thaliana4E-072972441352 (261)C
Os12g37640.1 7Oryza sativa046460780 (0)M
Os12g37640.2 7Oryza sativa1E-17840459780 (0)M
Os12g37640.4 7Oryza sativa3E-17838660790 (0)_
GRMZM2G135045_P01 3.21Zea mays045160790 (0)M
Zm00001eb028570_P002 agpv5Zea mays045160790 (0)M
GRMZM2G135045_P02 3.21Zea mays4E-14934857780 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 23S_rRNA_IVP(1) AMP_N(1) Peptidase_M24(1)
TargetP: Mitochondria (Class 1 C0.015; M0.959; S0.009; _0.058)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 493 aa (-cTP 474)
Molecular Weight 54.98 kDA(-cTP )
PI 6.94(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2306Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

20601493(mitochondria (diurnal change))
21311031(lysine-acetylated leaf)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help