PPDB

PPDB	The Plant Proteome Database

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AT1G09270.1 importin alpha isoform 4

Lab Annot.

importin alpha-1 subunit, putative (IMPA4)
Mapman: 29.3.1 protein.targeting.nucleus

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G09270.2 11 Arabidopsis thaliana 0 538 100 100 56 (13) _
AT1G09270.3 11 Arabidopsis thaliana 0 456 100 100 51 (12) _
AT3G06720.1 11 Arabidopsis thaliana 0 539 73 83 81 (32) _
Os05g06350.1 7 Oryza sativa 0 544 72 82 28 (28) _
Os01g14950.1 7 Oryza sativa 0 530 73 83 40 (40) _
Os01g24060.2 7 Oryza sativa 0 530 63 77 0 (0) _
GRMZM2G091119_P01 3.21 Zea mays 0 525 74 84 70 (26) _
v1_GRMZM2G091119_P01 4a53 Zea mays 0 525 74 84 30 (30) _
Zm00001eb127630_P001 agpv5 Zea mays 0 525 74 84 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Adaptin_N(1) Arm(8) Arm_2(3) Arm_3(1) Atx10homo_assoc(2) CTNNBL(3) HEAT(6) HEAT_
TargetP:	Cytoplasm (Class 5 C0.062; M0.411; S0.016; _0.584)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	538 aa (-cTP 530)
Molecular Weight	59.45 kDA(-cTP )
PI	5.20(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
325	Detail								BY2 cell suspension [Tobacco]	cell wall enriched	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1532	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	clps (rep. 1)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2245	Detail								seedlings [A. thaliana]	total tissue	wild-type
2287	Detail								[A. thaliana]		Clp C1 WT
2320	Detail								[A. thaliana]	Thylakoids plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
20706207(cell cycle interactome (cell culture))
19114538(guard cells Arabidopsis leaf)
21693672(wound-regulated leaf proteome (wt))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data