PPDB

PPDB	The Plant Proteome Database

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AT1G08840.1 DNA replication helicase

Lab Annot.

DNA replication helicase, putative
Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G08840.2 11 Arabidopsis thaliana 0 1315 98 98 1 (1) C
AT1G08840.4 11 Arabidopsis thaliana 0 1328 97 97 0 (0) C
AT1G08840.3 11 Arabidopsis thaliana 0 1331 97 97 0 (0) C
Os04g49860.1 7 Oryza sativa 0 1198 54 69 0 (0) M
Os03g38990.1 7 Oryza sativa 2E-48 512 31 47 2 (2) C
Os09g04440.1 7 Oryza sativa 4E-37 485 27 44 0 (0) M
v1_GRMZM2G100732_P01 4a53 Zea mays 0 1285 52 67 0 (0) M
GRMZM2G100732_P01 3.21 Zea mays 0 1285 52 67 0 (0) M
Zm00001eb072560_P003 agpv5 Zea mays 0 1303 52 66 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_11(2) AAA_12(1) AAA_19(2) AAA_30(1) Dna2(1) Helicase_RecD(1) PDDEXK_1(1) Res
TargetP:	Chloroplast (Class 2 C0.902; M0.231; S0.006; _0.028)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1296 aa (-cTP 1239)
Molecular Weight	143.25 kDA(-cTP 137.05)
PI	6.59(-cTP 6.27)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2259	Detail								leaf [A. thaliana]	total seedlings	gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19334764(plasma membrane (cell culture))

Comparative Proteomics Data