PPDB

PPDB	The Plant Proteome Database

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AT1G08820.1 vamp/synaptobrevin-associated protein 27-2

Lab Annot.

vamp/synaptobrevin-associated protein 27-2
Mapman: 31.4 cell.vesicle transport

Curated Location

TAIR curated location: endoplasmic reticulum membrane11907339

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G08820.4 11 Arabidopsis thaliana 0 386 100 100 0 (0) _
AT1G08820.3 11 Arabidopsis thaliana 0 386 100 100 0 (0) _
AT1G08820.5 11 Arabidopsis thaliana 0 386 100 100 0 (0) _
Os01g71050.1 7 Oryza sativa 2E-61 392 36 52 0 (0) _
Os08g05890.1 7 Oryza sativa 1E-48 130 60 73 16 (16) _
Os08g05890.2 7 Oryza sativa 3E-48 130 60 73 16 (16) _
Zm00001eb141890_P002 agpv5 Zea mays 5E-62 398 37 53 0 (0) _
GRMZM2G053273_P02 3.21 Zea mays 5E-62 398 37 53 0 (0) _
Zm00001eb141890_P004 agpv5 Zea mays 1E-57 398 36 52 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ASH(1) CCDC-167(1) Cnn_1N(1) Motile_Sperm(1) PapD-like(1) Phage_GP20(1) She9_MDM
TargetP:	Cytoplasm (Class 3 C0.073; M0.183; S0.100; _0.600)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	386 aa (-cTP 328)
Molecular Weight	43.27 kDA(-cTP )
PI	6.53(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data