PPDB

The Plant Proteome Database

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AT1G08770.1   prenylated RAB acceptor 1.E

Lab Annot. prenylated rab acceptor (PRA1) protein
Mapman: 30.5 signalling.G-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G55190.1 11Arabidopsis thaliana2E-4217341640 (0)_
AT3G13710.1 11Arabidopsis thaliana5E-3718936571 (1)C
AT2G38360.1 11Arabidopsis thaliana2E-3318234537 (6)C
Os03g58410.1 7Oryza sativa2E-3314348662 (2)C
Os03g53070.1 7Oryza sativa6E-2616943620 (0)_
Os05g39670.1 7Oryza sativa3E-25164315328 (28)C
Zm00001eb215180_P001 agpv5Zea mays7E-3716944630 (0)C
v1_GRMZM2G147862_P01 4a53Zea mays1E-3516944630 (0)_
GRMZM2G147862_P01 3.21Zea mays1E-3516944630 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PRA1(1)
TargetP: Chloroplast (Class 5 C0.493; M0.218; S0.029; _0.473)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 3 TMs
Aramemnon: 4 TMs
TAT position:
Length 209 aa (-cTP 176) (-lTP 105)
Molecular Weight 22.41 kDA(-cTP 19.31)(-lTP 11.27)
PI 6.40(-cTP 6.07)(-lTP 4.576)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

22430844(Golgi-cell-culture)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help