PPDB

PPDB	The Plant Proteome Database

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AT1G08610.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G09900.1 11 Arabidopsis thaliana 1E-113 575 36 52 2 (2) _
AT3G04760.1 11 Arabidopsis thaliana 1E-78 436 32 53 34 (33) C
AT1G63080.1 11 Arabidopsis thaliana 7E-65 450 28 50 0 (0) M
Os10g33700.1 7 Oryza sativa 3E-130 448 43 65 0 (0) M
Os10g33700.2 7 Oryza sativa 3E-130 448 43 65 0 (0) M
Os02g35750.1 7 Oryza sativa 4E-87 477 34 54 0 (0) C
AC233892.1_FGP001 3.21 Zea mays 6E-127 449 42 63 0 (0) C
Zm00001eb045880_P001 agpv5 Zea mays 6E-127 449 42 63 0 (0) C
v1_AC233892.1_FGP001 4a53 Zea mays 6E-127 449 42 63 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Ank_5(2) Clathrin(2) DUF2889(1) MRP-S27(6) PPR(13) PPR_1(13) PPR_2(13) PPR_3(8)
TargetP:	Cytoplasm (Class 5 C0.250; M0.035; S0.259; _0.268)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	559 aa (-cTP 542)
Molecular Weight	62.72 kDA(-cTP )
PI	6.00(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data