PPDB

PPDB	The Plant Proteome Database

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AT1G08560.1 syntaxin of plants 111

Lab Annot.

Mapman: 31.4 cell.vesicle transport

Curated Location

TAIR curated location: phragmoplast9396754,8548827

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G61290.1 11 Arabidopsis thaliana 4E-91 309 45 66 1 (1) _
AT1G61290.2 11 Arabidopsis thaliana 4E-91 309 45 66 0 (0) _
AT4G03330.1 11 Arabidopsis thaliana 2E-80 308 44 66 0 (0) _
Os03g52650.1 7 Oryza sativa 1E-113 291 56 76 0 (0) _
Os06g39050.1 7 Oryza sativa 2E-87 315 42 66 0 (0) _
Os02g11890.1 7 Oryza sativa 3E-85 297 45 65 0 (0) _
Zm00001eb215350_P001 agpv5 Zea mays 1E-115 292 57 77 0 (0) _
v1_GRMZM2G100478_P01 4a53 Zea mays 1E-115 292 57 77 1 (1) _
GRMZM2G100478_P01 3.21 Zea mays 1E-115 292 57 77 1 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3150(2) DUF3675(1) DUF5089(3) Lge1(2) MCPsignal(3) Prefoldin_2(4) Seryl_tRNA_
TargetP:	Cytoplasm (Class 3 C0.031; M0.059; S0.365; _0.849)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	310 aa (-cTP 277)
Molecular Weight	35.27 kDA(-cTP )
PI	5.82(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17644812(plasma membrane - suspension cells)
21533090(plasmodesmata-crude)

Comparative Proteomics Data