PPDB

PPDB	The Plant Proteome Database

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AT1G08530.1 chitinase-like protein

Lab Annot.

unkown protein
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G08530.3 11 Arabidopsis thaliana 2E-148 209 100 100 0 (0) C
AT1G08530.2 11 Arabidopsis thaliana 2E-121 175 100 100 0 (0) C
AT5G09995.2 11 Arabidopsis thaliana 3E-28 253 33 53 1 (1) C
Os12g24240.1 7 Oryza sativa 4E-39 100 70 79 0 (0) S
Os06g12129.1 7 Oryza sativa 2E-11 85 38 65 0 (0) C
Os05g04650.1 7 Oryza sativa 4E-07 101 32 56 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF948(1)
TargetP:	Chloroplast (Class 2 C0.817; M0.058; S0.010; _0.100)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	257 aa (-cTP 223)
Molecular Weight	27.01 kDA(-cTP 23.23)
PI	7.72(-cTP 5.95)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20061580(chloroplast envelope (inner+outer))
21515685(GreenCut2)

Comparative Proteomics Data